轉(zhuǎn):http://blog.sina.com.cn/s/blog_1602d6cc60102whiq.html
1.根據(jù)lncRNA與疾病的關系,比如:
CCAT1:Colon
cancerassociated transcript-1株依;
MIAT:myocardial
infarction associated transcript驱证,也叫RNCR2(retinal non-coding RNA2);
UCA1:Urothelial
carcinoma associated 1 ,
HULC:Highly
Upregulated in Liver Cancer恋腕。
2.根據(jù)lncRNA與周圍基因的位置抹锄,比如:
BACE1-AS:BACE1
antisense RNA;
HIF1A-AS2:LncRNAhypoxiainducible factor1alphaantisenseRNA-2
lincRNAHOTAIR:lincRNAHOXtranscript antisense RNA吗坚;
HOTTIP:lncRNA
HOXA transcript at the distal tip (HOTTIP)
而lncRNAasf的命名就直接是調(diào)控靶基因Fas的字母反過來祈远。
3.根據(jù)lncRNA與基因上下游的調(diào)控關系,比如:
BANCR:BRAF-regulatedlncRNA1商源,
ATB:lncRNA-activated
by TGF-β车份,
PANDA:P21-associated
noncoding RNA DNA damage-activated。
4.根據(jù)lncRNA參與的生物學功能牡彻,比如:
LincRNA-ROR:Long
Intergenic Non-Protein Coding RNA, Regulator Of
Reprogramming扫沼,
Xist:X-inactive-specific
transcript,
GAS5:growtharrest-specific5庄吼。
5.根據(jù)在細胞內(nèi)的定位缎除,比如:
Neat1:LncRNAnuclear-enrichedabundant transcript 1。
當然总寻,這是我們根據(jù)現(xiàn)在查到的分子進行總結(jié)的器罐,有的就直接使用我們前面提到的ENST,RP等ID來用渐行,也未嘗不可轰坊。