第二期20160301-論文燴

改進(jìn)

因為是剛剛開始做這個項目惰匙,所以肯定有很多不足的地方,歡迎大家給我提出來.我自己也在不斷改進(jìn).我的郵箱 : iphyer#163.com

今天的改進(jìn):

  1. 去除圖片,因為圖片雖然給出的信息量很大,但是在編輯文章的時候很難處理,同時如果有需要大家簡單的登陸網(wǎng)站即可查看圖片.事實上动壤,判斷一篇論文除了發(fā)表檔次,通過摘要即可.當(dāng)然我每個都是看的淮逻,但是琼懊,只有我自己看著覺得非常好的才會摘錄進(jìn)來.因為很多圖片其實是要相關(guān)專業(yè)背景才能理解的.考慮到不是相關(guān)專業(yè)的同學(xué),所以不轉(zhuǎn)了.希望理解.
  2. 我自己比較熟悉的領(lǐng)域會給一些點(diǎn)評或者自己的讀后感.
  3. 標(biāo)注分類爬早,幫助大家方便地判斷是不是和自己的鄰域相關(guān)

** 特別提醒很多和你自己不太相關(guān)的鄰域閱讀摘要和看看圖片即可.**

1.Ancient gene flow from early modern humans into Eastern Neanderthals

http://www.nature.com/nature/journal/v530/n7591/full/nature16544.html

Subject terms

Evolutionary genetics
Evolutionary biology
Genetic variation
Anthropology

摘要

It has been shown that Neanderthals contributed genetically to modern humans outside Africa 47,000–65,000 years ago. Here we analyse the genomes of a Neanderthal and a Denisovan from the Altai Mountains in Siberia together with the sequences of chromosome 21 of two Neanderthals from Spain and Croatia. We find that a population that diverged early from other modern humans in Africa contributed genetically to the ancestors of Neanderthals from the Altai Mountains roughly 100,000 years ago. By contrast, we do not detect such a genetic contribution in the Denisovan or the two European Neanderthals. We conclude that in addition to later interbreeding events, the ancestors of Neanderthals from the Altai Mountains and early modern humans met and interbred, possibly in the Near East, many thousands of years earlier than previously thought.

2.Expanding antigen-specific regulatory networks to treat autoimmunity

http://www.nature.com/nature/journal/v530/n7591/full/nature16962.html

Subject terms

Autoimmunity
Autoimmune diseases

摘要

Regulatory T cells hold promise as targets for therapeutic intervention in autoimmunity, but approaches capable of expanding antigen-specific regulatory T cells in vivo are currently not available. Here we show that systemic delivery of nanoparticles coated with autoimmune-disease-relevant peptides bound to major histocompatibility complex class II (pMHCII) molecules triggers the generation and expansion of antigen-specific regulatory CD4+ T cell type 1 (TR1)-like cells in different mouse models, including mice humanized with lymphocytes from patients, leading to resolution of established autoimmune phenomena. Ten pMHCII-based nanomedicines show similar biological effects, regardless of genetic background, prevalence of the cognate T-cell population or MHC restriction. These nanomedicines promote the differentiation of disease-primed autoreactive T cells into TR1-like cells, which in turn suppress autoantigen-loaded antigen-presenting cells and drive the differentiation of cognate B cells into disease-suppressing regulatory B cells, without compromising systemic immunity. pMHCII-based nanomedicines thus represent a new class of drugs, potentially useful for treating a broad spectrum of autoimmune conditions in a disease-specific manner.

3.The dynamic N1-methyladenosine methylome in eukaryotic messenger RNA

http://www.nature.com/nature/journal/v530/n7591/full/nature16998.html

Subject terms

RNA
Epigenetics
RNA modification

摘要

Gene expression can be regulated post-transcriptionally through dynamic and reversible RNA modifications. A recent noteworthy example is N6-methyladenosine (m6A), which affects messenger RNA (mRNA) localization, stability, translation and splicing. Here we report on a new mRNA modification, N1-methyladenosine (m1A), that occurs on thousands of different gene transcripts in eukaryotic cells, from yeast to mammals, at an estimated average transcript stoichiometry of 20% in humans. Employing newly developed sequencing approaches, we show that m1A is enriched around the start codon upstream of the first splice site: it preferentially decorates more structured regions around canonical and alternative translation initiation sites, is dynamic in response to physiological conditions, and correlates positively with protein production. These unique features are highly conserved in mouse and human cells, strongly indicating a functional role for m1A in promoting translation of methylated mRNA.

4.Structural basis for activity regulation of MLL family methyltransferases

http://www.nature.com/nature/journal/v530/n7591/full/nature16952.html

Subject terms

Enzyme mechanisms
X-ray crystallography
Epigenetics
Histone post-translational modifications

摘要

The mixed lineage leukaemia (MLL) family of proteins (including MLL1–MLL4, SET1A and SET1B) specifically methylate histone 3 Lys4, and have pivotal roles in the transcriptional regulation of genes involved in haematopoiesis and development. The methyltransferase activity of MLL1, by itself severely compromised, is stimulated by the three conserved factors WDR5, RBBP5 and ASH2L, which are shared by all MLL family complexes. However, the molecular mechanism of how these factors regulate the activity of MLL proteins still remains poorly understood. Here we show that a minimized human RBBP5–ASH2L heterodimer is the structural unit that interacts with and activates all MLL family histone methyltransferases. Our structural, biochemical and computational analyses reveal a two-step activation mechanism of MLL family proteins. These findings provide unprecedented insights into the common theme and functional plasticity in complex assembly and activity regulation of MLL family methyltransferases, and also suggest a universal regulation mechanism for most histone methyltransferases.

5.The host galaxy of a fast radio burst

http://www.nature.com/nature/journal/v530/n7591/full/nature17140.html

Subject terms

Interstellar medium
Cosmology

摘要

In recent years, millisecond-duration radio signals originating in distant galaxies appear to have been discovered in the so-called fast radio bursts. These signals are dispersed according to a precise physical law and this dispersion is a key observable quantity, which, in tandem with a red shift measurement, can be used for fundamental physical investigations. Every fast radio burst has a dispersion measurement, but none before now have had a red shift measurement, because of the difficulty in pinpointing their celestial coordinates. Here we report the discovery of a fast radio burst and the identification of a fading radio transient lasting ~6 days after the event, which we use to identify the host galaxy; we measure the galaxy’s red shift to be z?=?0.492?±?0.008. The dispersion measure and red shift, in combination, provide a direct measurement of the cosmic density of ionized baryons in the intergalactic medium of ΩIGM?=?4.9?±?1.3 per cent, in agreement with the expectation from the Wilkinson Microwave Anisotropy Probe, and including all of the so-called ‘missing baryons’. The ~6-day radio transient is largely consistent with the radio afterglow of a short γ-ray burst, and its existence and timescale do not support progenitor models such as giant pulses from pulsars, and supernovae. This contrasts with the interpretation of another recently discovered fast radio burst, suggesting that there are at least two classes of bursts.

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