差異的甲基化
差異的甲基化位點(diǎn)位于基因的prometer區(qū)域,我們才去保留,主要包括(TSS200和TSS1500)
注釋文件來自ChAMP工具包幻工,data一下即可
一般的差異定義標(biāo)準(zhǔn)為
參考文獻(xiàn):Immune Signature-Based Subtypes of Cervical Squamous Cell Carcinoma Tightly Associated with
Human Papillomavirus Type 16 Expression, Molecular Features, and Clinical Outcome
差異標(biāo)準(zhǔn)提高:
參考文獻(xiàn):Epigenetic age acceleration of cervical squamous cell carcinoma converged to human papillomavirus 16/18 expression, immunoactivation, and favourable prognosis
promoter regions 默認(rèn)(TSS200和TSS1500)
參考文獻(xiàn):The signature of HBV-related liver disease in peripheral blood mononuclear cell DNA methylation