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CUT&Tag的分析——demo重復(fù) -
關(guān)于 MACS call ATAC-seq 數(shù)據(jù) Peak 時(shí)候的激烈討論（MACS3 正在開(kāi)發(fā)中）
Twitter 熱論：ATAC peak calling with MACS2 問(wèn)題 MACS3 github專(zhuān)門(mén)開(kāi)放了一個(gè)征對(duì) ATAC-se...
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關(guān)于 ChIPseeker 注釋轉(zhuǎn)錄因子 Peak 的一點(diǎn)思考個(gè)人觀點(diǎn)：將 ignoreDownstream 和 ignoreUpstream 的結(jié)果取并集更好的能代表 TF 結(jié)合的靶基因啟動(dòng)子區(qū)履恩？？希望明...
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ATAC-seq經(jīng)典之作論文標(biāo)題：Transposition of native chromatin for fast and sensitive epigenomic...
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ArchR ：scATAC-seq 分析可視化利器摸魚(yú)鏈接:https://twitter.com/CorcesVictor/status/1255880155366555648 官方鏈接:ht...
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scATAC分析實(shí)戰(zhàn)（step3）
Step3-Run chromVAR on se Running chromVAR on single-cell summarized expe...
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scATAC建庫(kù)scATAC_Methods 參考文獻(xiàn)：Massively parallel single-cell chromatin landscapes ...
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scATAC數(shù)據(jù)分析流程（上）Data processing using Cell Ranger ATAC software 用Cell Ranger軟件做的事情：align...
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scATAC分析實(shí)戰(zhàn)（step2)Step2-Get Peak Set Creating a peak set, summarized experiment and LSI cl...
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scATAC分析實(shí)戰(zhàn)（step1）scATAC_Code 對(duì)單細(xì)胞測(cè)序感興趣的可以先參考下面的課程：Analysis of single cell RNA-seq data：ht...
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